Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.94□□□□□ -0.34
Cdh17Q9R100 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.94□□□□□ -0.34
Cdh17Q9R100 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdh17Q9R100 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.94□□□□□ -0.34
Cdh17Q9R100 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.94□□□□□ -0.34
Cdh17Q9R100 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdh17Q9R100 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdh17Q9R100 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdh17Q9R100 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.93□□□□□ -0.34
Cdh17Q9R100 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh17Q9R100 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh17Q9R100 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh17Q9R100 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh17Q9R100 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh17Q9R100 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cdh17Q9R100 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh17Q9R100 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh17Q9R100 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh17Q9R100 Gm22189-201ENSMUST00000103822 86 ntBASIC12.92□□□□□ -0.34
Cdh17Q9R100 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh17Q9R100 Gm15321-201ENSMUST00000121290 288 ntBASIC12.92□□□□□ -0.34
Cdh17Q9R100 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.92□□□□□ -0.34
Cdh17Q9R100 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.92□□□□□ -0.34
Cdh17Q9R100 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.92□□□□□ -0.34
Cdh17Q9R100 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Cdh17Q9R100 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh17Q9R100 Mir8102-201ENSMUST00000184148 139 ntBASIC12.92□□□□□ -0.34
Cdh17Q9R100 Gm28760-201ENSMUST00000185995 736 ntBASIC12.92□□□□□ -0.34
Cdh17Q9R100 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.92□□□□□ -0.34
Cdh17Q9R100 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Cdh17Q9R100 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.92□□□□□ -0.34
Cdh17Q9R100 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh17Q9R100 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cdh17Q9R100 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh17Q9R100 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh17Q9R100 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms