Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 Gm22144-201ENSMUST00000157402 102 ntBASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 Gm25951-201ENSMUST00000175330 64 ntBASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 Gm45120-201ENSMUST00000208880 408 ntBASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 Gm807-202ENSMUST00000224929 408 ntBASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col4a4Q9QZR9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col4a4Q9QZR9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Gm14644-201ENSMUST00000116671 647 ntBASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Gm14921-201ENSMUST00000118643 908 ntBASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col4a4Q9QZR9 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms