Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2af1Q9D883 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2af1Q9D883 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2af1Q9D883 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2af1Q9D883 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2af1Q9D883 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
U2af1Q9D883 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
U2af1Q9D883 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
U2af1Q9D883 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2af1Q9D883 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2af1Q9D883 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2af1Q9D883 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC17.44■□□□□ 0.38
U2af1Q9D883 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
U2af1Q9D883 Gm8805-201ENSMUST00000117848 313 ntBASIC17.44■□□□□ 0.38
U2af1Q9D883 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC17.44■□□□□ 0.38
U2af1Q9D883 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2af1Q9D883 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2af1Q9D883 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
U2af1Q9D883 AC122305.4-201ENSMUST00000216159 1206 ntBASIC17.44■□□□□ 0.38
U2af1Q9D883 AC166349.1-201ENSMUST00000220866 695 ntBASIC17.44■□□□□ 0.38
U2af1Q9D883 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
U2af1Q9D883 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2af1Q9D883 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
U2af1Q9D883 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
U2af1Q9D883 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2af1Q9D883 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
U2af1Q9D883 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2af1Q9D883 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2af1Q9D883 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2af1Q9D883 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
U2af1Q9D883 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
U2af1Q9D883 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2af1Q9D883 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2af1Q9D883 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2af1Q9D883 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
U2af1Q9D883 AC131068.2-201ENSMUST00000226175 1453 ntBASIC17.44■□□□□ 0.38
U2af1Q9D883 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC17.43■□□□□ 0.38
U2af1Q9D883 Gm2824-203ENSMUST00000226189 1228 ntBASIC17.43■□□□□ 0.38
U2af1Q9D883 Gm10146-201ENSMUST00000072739 309 ntBASIC17.43■□□□□ 0.38
U2af1Q9D883 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
U2af1Q9D883 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
U2af1Q9D883 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
U2af1Q9D883 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
U2af1Q9D883 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
U2af1Q9D883 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
U2af1Q9D883 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
U2af1Q9D883 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
U2af1Q9D883 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
U2af1Q9D883 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
U2af1Q9D883 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
U2af1Q9D883 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
U2af1Q9D883 Gm5466-201ENSMUST00000119395 1890 ntBASIC17.42■□□□□ 0.38
U2af1Q9D883 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
U2af1Q9D883 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
U2af1Q9D883 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC17.42■□□□□ 0.38
U2af1Q9D883 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.42■□□□□ 0.38
U2af1Q9D883 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC17.42■□□□□ 0.38
U2af1Q9D883 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
U2af1Q9D883 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
U2af1Q9D883 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
U2af1Q9D883 AY702102-202ENSMUST00000194651 1173 ntBASIC17.42■□□□□ 0.38
U2af1Q9D883 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC17.42■□□□□ 0.38
U2af1Q9D883 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC17.42■□□□□ 0.38
U2af1Q9D883 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC17.42■□□□□ 0.38
U2af1Q9D883 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC17.42■□□□□ 0.38
U2af1Q9D883 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
U2af1Q9D883 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
U2af1Q9D883 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
U2af1Q9D883 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
U2af1Q9D883 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
U2af1Q9D883 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
U2af1Q9D883 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
U2af1Q9D883 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
U2af1Q9D883 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
U2af1Q9D883 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
U2af1Q9D883 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
U2af1Q9D883 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms