Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cfap53Q9D439 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cfap53Q9D439 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cfap53Q9D439 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.58□□□□□ -0.08
Cfap53Q9D439 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cfap53Q9D439 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cfap53Q9D439 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.58□□□□□ -0.08
Cfap53Q9D439 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.58□□□□□ -0.08
Cfap53Q9D439 Gm18624-201ENSMUST00000220966 658 ntBASIC14.58□□□□□ -0.08
Cfap53Q9D439 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Cfap53Q9D439 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.58□□□□□ -0.08
Cfap53Q9D439 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cfap53Q9D439 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.58□□□□□ -0.08
Cfap53Q9D439 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cfap53Q9D439 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.58□□□□□ -0.08
Cfap53Q9D439 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cfap53Q9D439 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cfap53Q9D439 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cfap53Q9D439 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cfap53Q9D439 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cfap53Q9D439 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cfap53Q9D439 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Cfap53Q9D439 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cfap53Q9D439 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cfap53Q9D439 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.57□□□□□ -0.08
Cfap53Q9D439 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Cfap53Q9D439 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Mir6392-201ENSMUST00000184924 108 ntBASIC14.57□□□□□ -0.08
Cfap53Q9D439 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Gm29608-201ENSMUST00000190444 463 ntBASIC14.57□□□□□ -0.08
Cfap53Q9D439 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.57□□□□□ -0.08
Cfap53Q9D439 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.57□□□□□ -0.08
Cfap53Q9D439 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.57□□□□□ -0.08
Cfap53Q9D439 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.57□□□□□ -0.08
Cfap53Q9D439 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.57□□□□□ -0.08
Cfap53Q9D439 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Cfap53Q9D439 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cfap53Q9D439 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cfap53Q9D439 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap53Q9D439 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap53Q9D439 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.56□□□□□ -0.08
Cfap53Q9D439 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Gm15678-201ENSMUST00000117573 960 ntBASIC14.56□□□□□ -0.08
Cfap53Q9D439 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.56□□□□□ -0.08
Cfap53Q9D439 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Gm15823-201ENSMUST00000064305 670 ntBASIC14.56□□□□□ -0.08
Cfap53Q9D439 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cfap53Q9D439 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms