Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.46□□□□□ -0.41
Chaf1bQ9D0N7 Mir1897-201ENSMUST00000122581 272 ntBASIC12.46□□□□□ -0.41
Chaf1bQ9D0N7 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.46□□□□□ -0.41
Chaf1bQ9D0N7 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Chaf1bQ9D0N7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Chaf1bQ9D0N7 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.46□□□□□ -0.41
Chaf1bQ9D0N7 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.46□□□□□ -0.41
Chaf1bQ9D0N7 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chaf1bQ9D0N7 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Chaf1bQ9D0N7 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Chaf1bQ9D0N7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Chaf1bQ9D0N7 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Chaf1bQ9D0N7 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chaf1bQ9D0N7 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Chaf1bQ9D0N7 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Chaf1bQ9D0N7 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chaf1bQ9D0N7 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Chaf1bQ9D0N7 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chaf1bQ9D0N7 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chaf1bQ9D0N7 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Chaf1bQ9D0N7 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chaf1bQ9D0N7 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.46□□□□□ -0.42
Chaf1bQ9D0N7 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Chaf1bQ9D0N7 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Gm24543-201ENSMUST00000103867 82 ntBASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Gm12428-201ENSMUST00000119844 727 ntBASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Gm13385-201ENSMUST00000121089 220 ntBASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chaf1bQ9D0N7 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Mir874-201ENSMUST00000104769 76 ntBASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Gm15770-201ENSMUST00000117498 584 ntBASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Gm15678-201ENSMUST00000117573 960 ntBASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Mir1895-201ENSMUST00000122615 79 ntBASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Mir6990-201ENSMUST00000183724 91 ntBASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chaf1bQ9D0N7 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms