Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Gm23935-201ENSMUST00000102303 57 ntBASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Gm24270-201ENSMUST00000102326 57 ntBASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Gm25287-201ENSMUST00000103846 110 ntBASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Gm22918-201ENSMUST00000103855 110 ntBASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Gm24245-201ENSMUST00000157318 57 ntBASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Gm18889-201ENSMUST00000174284 929 ntBASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Gm27494-201ENSMUST00000184735 189 ntBASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Gm29541-201ENSMUST00000191351 678 ntBASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Gm16476-201ENSMUST00000221544 139 ntBASIC12.27□□□□□ -0.45
Trim13Q9CYB0 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.27□□□□□ -0.45
Trim13Q9CYB0 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.27□□□□□ -0.45
Trim13Q9CYB0 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim13Q9CYB0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Mir1895-201ENSMUST00000122615 79 ntBASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim13Q9CYB0 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim13Q9CYB0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms