Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Gm5566-201ENSMUST00000116118 459 ntBASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Gm45612-201ENSMUST00000211320 160 ntBASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx47Q9CWX9 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Gm9727-201ENSMUST00000161387 555 ntBASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Gm9719-201ENSMUST00000162765 543 ntBASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx47Q9CWX9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Gm15770-201ENSMUST00000117498 584 ntBASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Gm21470-201ENSMUST00000187680 696 ntBASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Gm8000-201ENSMUST00000188378 592 ntBASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Gm16476-201ENSMUST00000221544 139 ntBASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ddx47Q9CWX9 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms