Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim16Q99PP9 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Trim16Q99PP9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13□□□□□ -0.33
Trim16Q99PP9 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim16Q99PP9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Gm8337-201ENSMUST00000187358 1938 ntBASIC13□□□□□ -0.33
Trim16Q99PP9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trim16Q99PP9 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim16Q99PP9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13□□□□□ -0.33
Trim16Q99PP9 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13□□□□□ -0.33
Trim16Q99PP9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Ldb3-207ENSMUST00000227819 1499 ntBASIC13□□□□□ -0.33
Trim16Q99PP9 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13□□□□□ -0.33
Trim16Q99PP9 Gm7488-201ENSMUST00000117148 684 ntBASIC13□□□□□ -0.33
Trim16Q99PP9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13□□□□□ -0.33
Trim16Q99PP9 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Gm31326-201ENSMUST00000191856 1048 ntBASIC13□□□□□ -0.33
Trim16Q99PP9 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim16Q99PP9 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim16Q99PP9 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trim16Q99PP9 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trim16Q99PP9 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trim16Q99PP9 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.99□□□□□ -0.33
Trim16Q99PP9 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Trim16Q99PP9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim16Q99PP9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.98□□□□□ -0.33
Trim16Q99PP9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim16Q99PP9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim16Q99PP9 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trim16Q99PP9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim16Q99PP9 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms