Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn4Q99P72 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn4Q99P72 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rtn4Q99P72 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC17.34■□□□□ 0.37
Rtn4Q99P72 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC17.34■□□□□ 0.37
Rtn4Q99P72 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rtn4Q99P72 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.34■□□□□ 0.37
Rtn4Q99P72 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn4Q99P72 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn4Q99P72 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn4Q99P72 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn4Q99P72 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn4Q99P72 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn4Q99P72 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn4Q99P72 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn4Q99P72 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn4Q99P72 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn4Q99P72 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn4Q99P72 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtn4Q99P72 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rtn4Q99P72 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.33■□□□□ 0.37
Rtn4Q99P72 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rtn4Q99P72 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rtn4Q99P72 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rtn4Q99P72 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rtn4Q99P72 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rtn4Q99P72 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.33■□□□□ 0.36
Rtn4Q99P72 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC17.33■□□□□ 0.36
Rtn4Q99P72 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Gm42782-201ENSMUST00000197286 522 ntBASIC17.33■□□□□ 0.36
Rtn4Q99P72 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Gm18027-201ENSMUST00000218947 619 ntBASIC17.33■□□□□ 0.36
Rtn4Q99P72 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn4Q99P72 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rtn4Q99P72 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Gm30238-201ENSMUST00000195528 2603 ntBASIC17.32■□□□□ 0.36
Rtn4Q99P72 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Gm9164-201ENSMUST00000118700 1014 ntBASIC17.32■□□□□ 0.36
Rtn4Q99P72 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4Q99P72 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC17.32■□□□□ 0.36
Rtn4Q99P72 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Gm5354-201ENSMUST00000182417 973 ntBASIC17.32■□□□□ 0.36
Rtn4Q99P72 Gm8641-201ENSMUST00000186995 826 ntBASIC17.32■□□□□ 0.36
Rtn4Q99P72 Gm42783-201ENSMUST00000197075 795 ntBASIC17.32■□□□□ 0.36
Rtn4Q99P72 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4Q99P72 AC238811.3-201ENSMUST00000225422 709 ntBASIC17.32■□□□□ 0.36
Rtn4Q99P72 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.32■□□□□ 0.36
Rtn4Q99P72 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn4Q99P72 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms