Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC16.29■□□□□ 0.2
RtcbQ99LF4 Gm9083-201ENSMUST00000120423 819 ntBASIC16.29■□□□□ 0.2
RtcbQ99LF4 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC16.29■□□□□ 0.2
RtcbQ99LF4 Gm6161-201ENSMUST00000121942 1102 ntBASIC16.29■□□□□ 0.2
RtcbQ99LF4 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Gm6254-201ENSMUST00000168178 1072 ntBASIC16.29■□□□□ 0.2
RtcbQ99LF4 Gm6153-201ENSMUST00000172004 1058 ntBASIC16.29■□□□□ 0.2
RtcbQ99LF4 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Gm27023-201ENSMUST00000182372 285 ntBASIC16.29■□□□□ 0.2
RtcbQ99LF4 Gm5641-202ENSMUST00000198699 1080 ntBASIC16.29■□□□□ 0.2
RtcbQ99LF4 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RtcbQ99LF4 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.28■□□□□ 0.2
RtcbQ99LF4 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.28■□□□□ 0.2
RtcbQ99LF4 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.28■□□□□ 0.2
RtcbQ99LF4 Gm11331-201ENSMUST00000119764 288 ntBASIC16.28■□□□□ 0.2
RtcbQ99LF4 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RtcbQ99LF4 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC16.28■□□□□ 0.2
RtcbQ99LF4 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Gm44772-201ENSMUST00000207623 1191 ntBASIC16.28■□□□□ 0.2
RtcbQ99LF4 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Gm8385-201ENSMUST00000058999 643 ntBASIC16.28■□□□□ 0.2
RtcbQ99LF4 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RtcbQ99LF4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RtcbQ99LF4 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RtcbQ99LF4 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
RtcbQ99LF4 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RtcbQ99LF4 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RtcbQ99LF4 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RtcbQ99LF4 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RtcbQ99LF4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RtcbQ99LF4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RtcbQ99LF4 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RtcbQ99LF4 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC16.27■□□□□ 0.2
RtcbQ99LF4 Gm14704-201ENSMUST00000120300 874 ntBASIC16.27■□□□□ 0.2
RtcbQ99LF4 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC16.27■□□□□ 0.2
RtcbQ99LF4 Gm25700-201ENSMUST00000177693 110 ntBASIC16.27■□□□□ 0.2
RtcbQ99LF4 Gm18916-201ENSMUST00000198264 1246 ntBASIC16.27■□□□□ 0.2
RtcbQ99LF4 Gm44405-201ENSMUST00000198952 126 ntBASIC16.27■□□□□ 0.2
RtcbQ99LF4 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RtcbQ99LF4 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RtcbQ99LF4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RtcbQ99LF4 CT009713.10-201ENSMUST00000225013 1986 ntBASIC16.27■□□□□ 0.19
RtcbQ99LF4 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC16.27■□□□□ 0.19
RtcbQ99LF4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RtcbQ99LF4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.27■□□□□ 0.19
RtcbQ99LF4 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RtcbQ99LF4 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.27■□□□□ 0.19
RtcbQ99LF4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RtcbQ99LF4 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.27■□□□□ 0.19
RtcbQ99LF4 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RtcbQ99LF4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.26■□□□□ 0.19
RtcbQ99LF4 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RtcbQ99LF4 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RtcbQ99LF4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RtcbQ99LF4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms