Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.38□□□□□ -0.27
Cdk9Q99J95 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.38□□□□□ -0.27
Cdk9Q99J95 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk9Q99J95 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk9Q99J95 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.38□□□□□ -0.27
Cdk9Q99J95 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk9Q99J95 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.37□□□□□ -0.27
Cdk9Q99J95 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.37□□□□□ -0.27
Cdk9Q99J95 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.37□□□□□ -0.27
Cdk9Q99J95 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.37□□□□□ -0.27
Cdk9Q99J95 Gm43125-201ENSMUST00000201724 730 ntBASIC13.37□□□□□ -0.27
Cdk9Q99J95 Gm5312-201ENSMUST00000203728 547 ntBASIC13.37□□□□□ -0.27
Cdk9Q99J95 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk9Q99J95 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cdk9Q99J95 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.37□□□□□ -0.27
Cdk9Q99J95 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk9Q99J95 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk9Q99J95 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.36□□□□□ -0.27
Cdk9Q99J95 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.36□□□□□ -0.27
Cdk9Q99J95 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Gm43474-201ENSMUST00000196415 774 ntBASIC13.36□□□□□ -0.27
Cdk9Q99J95 Gm18049-201ENSMUST00000208909 581 ntBASIC13.36□□□□□ -0.27
Cdk9Q99J95 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk9Q99J95 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.36□□□□□ -0.27
Cdk9Q99J95 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cdk9Q99J95 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Mir497b-201ENSMUST00000093601 125 ntBASIC13.36□□□□□ -0.27
Cdk9Q99J95 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Cdk9Q99J95 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdk9Q99J95 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms