Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Gm16202-201ENSMUST00000117532 544 ntBASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Gm11814-201ENSMUST00000119515 929 ntBASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Gm8598-201ENSMUST00000221184 836 ntBASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pcdha9Q91Y11 Grk6-205ENSMUST00000224653 2976 ntBASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Gm10156-201ENSMUST00000122364 462 ntBASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Proscos-202ENSMUST00000178990 666 ntBASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Gm5035-201ENSMUST00000215581 927 ntBASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pcdha9Q91Y11 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Gm11978-201ENSMUST00000122315 466 ntBASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Gm27486-201ENSMUST00000184923 80 ntBASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pcdha9Q91Y11 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.15
Pcdha9Q91Y11 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdha9Q91Y11 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pcdha9Q91Y11 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.08□□□□□ -0.16
Pcdha9Q91Y11 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 7.7 ms