Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhac2Q91Y09 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhac2Q91Y09 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhac2Q91Y09 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhac2Q91Y09 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhac2Q91Y09 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhac2Q91Y09 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhac2Q91Y09 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhac2Q91Y09 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhac2Q91Y09 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhac2Q91Y09 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhac2Q91Y09 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhac2Q91Y09 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.33□□□□□ -0.11
Pcdhac2Q91Y09 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Pcdhac2Q91Y09 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Gm11964-201ENSMUST00000120982 444 ntBASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Gm25668-201ENSMUST00000157700 129 ntBASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Gm30285-201ENSMUST00000214614 422 ntBASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdhac2Q91Y09 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Acot6-202ENSMUST00000222921 3622 ntBASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhac2Q91Y09 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhac2Q91Y09 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhac2Q91Y09 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms