Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb20Q91XZ9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Gm5530-201ENSMUST00000117185 985 ntBASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Gm12091-201ENSMUST00000146791 830 ntBASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Gm7211-201ENSMUST00000172692 1118 ntBASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Gm9794-201ENSMUST00000202370 423 ntBASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Gm18996-201ENSMUST00000214851 755 ntBASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb20Q91XZ9 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Gm44562-201ENSMUST00000207194 1347 ntBASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Gm11424-201ENSMUST00000121929 829 ntBASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Gm23984-201ENSMUST00000157139 203 ntBASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Gm26238-201ENSMUST00000175538 117 ntBASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Gm21943-201ENSMUST00000178181 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Gm45078-201ENSMUST00000205343 546 ntBASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Gm8607-201ENSMUST00000221864 431 ntBASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Gm6180-201ENSMUST00000065243 498 ntBASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb20Q91XZ9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms