Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Gm15770-201ENSMUST00000117498 584 ntBASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Gm38223-201ENSMUST00000194484 695 ntBASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga4Q91XY4 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Gm5161-201ENSMUST00000075243 853 ntBASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Gm24447-201ENSMUST00000083977 338 ntBASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhga4Q91XY4 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga4Q91XY4 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhga4Q91XY4 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pcdhga4Q91XY4 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pcdhga4Q91XY4 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga4Q91XY4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga4Q91XY4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhga4Q91XY4 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms