Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vsx1Q91V10 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Gm12403-201ENSMUST00000121384 959 ntBASIC13.1□□□□□ -0.31
Vsx1Q91V10 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Gm3890-201ENSMUST00000182416 207 ntBASIC13.1□□□□□ -0.31
Vsx1Q91V10 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.1□□□□□ -0.31
Vsx1Q91V10 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.1□□□□□ -0.31
Vsx1Q91V10 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Gm17330-201ENSMUST00000221047 165 ntBASIC13.1□□□□□ -0.31
Vsx1Q91V10 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.1□□□□□ -0.31
Vsx1Q91V10 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.1□□□□□ -0.31
Vsx1Q91V10 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.1□□□□□ -0.31
Vsx1Q91V10 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vsx1Q91V10 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Gm14350-201ENSMUST00000116642 640 ntBASIC13.09□□□□□ -0.31
Vsx1Q91V10 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Vsx1Q91V10 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Gm22334-201ENSMUST00000158070 133 ntBASIC13.09□□□□□ -0.31
Vsx1Q91V10 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.09□□□□□ -0.31
Vsx1Q91V10 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.09□□□□□ -0.31
Vsx1Q91V10 Gm38144-201ENSMUST00000192790 465 ntBASIC13.09□□□□□ -0.31
Vsx1Q91V10 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Vsx1Q91V10 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.09□□□□□ -0.31
Vsx1Q91V10 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.09□□□□□ -0.31
Vsx1Q91V10 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.09□□□□□ -0.31
Vsx1Q91V10 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms