Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Gm6152-201ENSMUST00000151704 340 ntBASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Gm7287-201ENSMUST00000205267 602 ntBASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb11Q91UZ8 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb11Q91UZ8 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb11Q91UZ8 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb11Q91UZ8 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb11Q91UZ8 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb11Q91UZ8 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.58□□□□□ -0.23
Pcdhb11Q91UZ8 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb11Q91UZ8 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Pcdhb11Q91UZ8 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Gm13612-201ENSMUST00000119276 390 ntBASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Mir7221-201ENSMUST00000184009 72 ntBASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdhb11Q91UZ8 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms