Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
StrcQ8VIM6 AC091458.1-201ENSMUST00000220902 1361 ntBASIC15.37■□□□□ 0.05
StrcQ8VIM6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
StrcQ8VIM6 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
StrcQ8VIM6 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.37■□□□□ 0.05
StrcQ8VIM6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
StrcQ8VIM6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
StrcQ8VIM6 Gm11892-201ENSMUST00000117711 1202 ntBASIC15.37■□□□□ 0.05
StrcQ8VIM6 Gm15573-201ENSMUST00000119487 540 ntBASIC15.37■□□□□ 0.05
StrcQ8VIM6 Gm5863-201ENSMUST00000121760 1008 ntBASIC15.37■□□□□ 0.05
StrcQ8VIM6 Gm16397-201ENSMUST00000122201 494 ntBASIC15.37■□□□□ 0.05
StrcQ8VIM6 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
StrcQ8VIM6 Gm23119-201ENSMUST00000158610 140 ntBASIC15.37■□□□□ 0.05
StrcQ8VIM6 Gm28071-201ENSMUST00000190355 478 ntBASIC15.37■□□□□ 0.05
StrcQ8VIM6 Gm4482-201ENSMUST00000200876 742 ntBASIC15.37■□□□□ 0.05
StrcQ8VIM6 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
StrcQ8VIM6 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
StrcQ8VIM6 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
StrcQ8VIM6 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
StrcQ8VIM6 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
StrcQ8VIM6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
StrcQ8VIM6 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
StrcQ8VIM6 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
StrcQ8VIM6 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
StrcQ8VIM6 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
StrcQ8VIM6 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
StrcQ8VIM6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
StrcQ8VIM6 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
StrcQ8VIM6 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.37■□□□□ 0.05
StrcQ8VIM6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
StrcQ8VIM6 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
StrcQ8VIM6 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
StrcQ8VIM6 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
StrcQ8VIM6 AC158355.1-201ENSMUST00000215895 1705 ntBASIC15.36■□□□□ 0.05
StrcQ8VIM6 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Gm16166-201ENSMUST00000118291 787 ntBASIC15.36■□□□□ 0.05
StrcQ8VIM6 Gm15595-201ENSMUST00000120840 961 ntBASIC15.36■□□□□ 0.05
StrcQ8VIM6 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC15.36■□□□□ 0.05
StrcQ8VIM6 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
StrcQ8VIM6 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
StrcQ8VIM6 AC174797.2-202ENSMUST00000225729 568 ntBASIC15.36■□□□□ 0.05
StrcQ8VIM6 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.36■□□□□ 0.05
StrcQ8VIM6 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.36■□□□□ 0.05
StrcQ8VIM6 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.35■□□□□ 0.05
StrcQ8VIM6 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.35■□□□□ 0.05
StrcQ8VIM6 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
StrcQ8VIM6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC15.35■□□□□ 0.05
StrcQ8VIM6 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC15.35■□□□□ 0.05
StrcQ8VIM6 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
StrcQ8VIM6 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.35■□□□□ 0.05
StrcQ8VIM6 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
StrcQ8VIM6 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms