Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Vps4aQ8VEJ9 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Gm10766-202ENSMUST00000194123 606 ntBASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps4aQ8VEJ9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Gm27892-201ENSMUST00000185017 106 ntBASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps4aQ8VEJ9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Gm8927-201ENSMUST00000181978 981 ntBASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Gm3222-201ENSMUST00000071282 990 ntBASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Vps4aQ8VEJ9 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms