Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Uhrf1Q8VDF2 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.67□□□□□ -0.22
Uhrf1Q8VDF2 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Uhrf1Q8VDF2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Uhrf1Q8VDF2 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Gm24990-201ENSMUST00000157406 323 ntBASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Nsd1-205ENSMUST00000224693 852 ntBASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Uhrf1Q8VDF2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Snord83b-201ENSMUST00000104546 94 ntBASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Uhrf1Q8VDF2 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Gm13097-201ENSMUST00000210722 397 ntBASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Uhrf1Q8VDF2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms