Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Rpap2Q8VC34 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Gm38671-201ENSMUST00000200573 130 ntBASIC14.56□□□□□ -0.08
Rpap2Q8VC34 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Rpap2Q8VC34 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpap2Q8VC34 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rpap2Q8VC34 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpap2Q8VC34 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpap2Q8VC34 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpap2Q8VC34 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpap2Q8VC34 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rpap2Q8VC34 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Rpap2Q8VC34 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.55□□□□□ -0.08
Rpap2Q8VC34 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.55□□□□□ -0.08
Rpap2Q8VC34 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.55□□□□□ -0.08
Rpap2Q8VC34 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rpap2Q8VC34 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.55□□□□□ -0.08
Rpap2Q8VC34 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.55□□□□□ -0.08
Rpap2Q8VC34 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpap2Q8VC34 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Rpap2Q8VC34 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rpap2Q8VC34 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rpap2Q8VC34 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpap2Q8VC34 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.55□□□□□ -0.08
Rpap2Q8VC34 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Rpap2Q8VC34 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpap2Q8VC34 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Gm15806-201ENSMUST00000120696 955 ntBASIC14.54□□□□□ -0.08
Rpap2Q8VC34 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Gm9002-201ENSMUST00000178437 499 ntBASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Gm6244-201ENSMUST00000178732 841 ntBASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Gm44069-201ENSMUST00000204898 506 ntBASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Rpap2Q8VC34 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Gm5186-201ENSMUST00000218781 920 ntBASIC14.54□□□□□ -0.08
Rpap2Q8VC34 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Gm16372-201ENSMUST00000073088 450 ntBASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpap2Q8VC34 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpap2Q8VC34 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms