Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Vps39Q8R5L3 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Gm11524-201ENSMUST00000119349 807 ntBASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Gm12151-201ENSMUST00000121374 290 ntBASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Gm24694-201ENSMUST00000180054 110 ntBASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Gm27663-201ENSMUST00000184839 110 ntBASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.31□□□□□ -0.28
Vps39Q8R5L3 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps39Q8R5L3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Gm14719-201ENSMUST00000121891 340 ntBASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Gm28760-201ENSMUST00000185995 736 ntBASIC13.3□□□□□ -0.28
Vps39Q8R5L3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Gm19078-201ENSMUST00000206311 727 ntBASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps39Q8R5L3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.29□□□□□ -0.28
Vps39Q8R5L3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms