Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Gm43125-201ENSMUST00000201724 730 ntBASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Gm15500-202ENSMUST00000071641 1019 ntBASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nup35Q8R4R6 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.81□□□□□ -0.68
Nup35Q8R4R6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 AC124549.3-201ENSMUST00000225541 367 ntBASIC10.81□□□□□ -0.68
Nup35Q8R4R6 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nup35Q8R4R6 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Gm15467-201ENSMUST00000120582 445 ntBASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Pck2-205ENSMUST00000226352 2784 ntBASIC10.8□□□□□ -0.68
Nup35Q8R4R6 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms