Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd109Q8R422 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cd109Q8R422 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd109Q8R422 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cd109Q8R422 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cd109Q8R422 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cd109Q8R422 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd109Q8R422 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd109Q8R422 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd109Q8R422 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cd109Q8R422 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd109Q8R422 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd109Q8R422 Gm37737-201ENSMUST00000195013 1638 ntBASIC18.63■□□□□ 0.57
Cd109Q8R422 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC18.63■□□□□ 0.57
Cd109Q8R422 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd109Q8R422 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd109Q8R422 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd109Q8R422 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd109Q8R422 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cd109Q8R422 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd109Q8R422 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd109Q8R422 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd109Q8R422 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd109Q8R422 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cd109Q8R422 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cd109Q8R422 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd109Q8R422 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cd109Q8R422 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Cd109Q8R422 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd109Q8R422 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd109Q8R422 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cd109Q8R422 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cd109Q8R422 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd109Q8R422 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd109Q8R422 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd109Q8R422 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cd109Q8R422 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd109Q8R422 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd109Q8R422 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cd109Q8R422 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC18.62■□□□□ 0.57
Cd109Q8R422 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd109Q8R422 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cd109Q8R422 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cd109Q8R422 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cd109Q8R422 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd109Q8R422 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd109Q8R422 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC18.62■□□□□ 0.57
Cd109Q8R422 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd109Q8R422 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd109Q8R422 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd109Q8R422 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cd109Q8R422 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cd109Q8R422 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC18.62■□□□□ 0.57
Cd109Q8R422 AA914427-201ENSMUST00000193194 1166 ntBASIC18.62■□□□□ 0.57
Cd109Q8R422 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC18.62■□□□□ 0.57
Cd109Q8R422 Gm5904-201ENSMUST00000210286 865 ntBASIC18.62■□□□□ 0.57
Cd109Q8R422 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd109Q8R422 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd109Q8R422 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd109Q8R422 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC18.62■□□□□ 0.57
Cd109Q8R422 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cd109Q8R422 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cd109Q8R422 AC113441.2-201ENSMUST00000221538 1468 ntBASIC18.62■□□□□ 0.57
Cd109Q8R422 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd109Q8R422 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd109Q8R422 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cd109Q8R422 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd109Q8R422 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cd109Q8R422 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd109Q8R422 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cd109Q8R422 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd109Q8R422 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cd109Q8R422 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd109Q8R422 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC18.61■□□□□ 0.57
Cd109Q8R422 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd109Q8R422 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd109Q8R422 Gm25043-201ENSMUST00000158604 212 ntBASIC18.61■□□□□ 0.57
Cd109Q8R422 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cd109Q8R422 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd109Q8R422 Gm8885-201ENSMUST00000189382 598 ntBASIC18.61■□□□□ 0.57
Cd109Q8R422 Gm5869-201ENSMUST00000200248 1257 ntBASIC18.61■□□□□ 0.57
Cd109Q8R422 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC18.61■□□□□ 0.57
Cd109Q8R422 CT030182.1-201ENSMUST00000225935 533 ntBASIC18.61■□□□□ 0.57
Cd109Q8R422 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd109Q8R422 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Cd109Q8R422 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd109Q8R422 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cd109Q8R422 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd109Q8R422 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd109Q8R422 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd109Q8R422 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cd109Q8R422 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd109Q8R422 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cd109Q8R422 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cd109Q8R422 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cd109Q8R422 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cd109Q8R422 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC18.61■□□□□ 0.57
Cd109Q8R422 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cd109Q8R422 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cd109Q8R422 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms