Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.54□□□□□ -0.4
Clrn1Q8K445 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Clrn1Q8K445 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.53□□□□□ -0.4
Clrn1Q8K445 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.53□□□□□ -0.4
Clrn1Q8K445 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.53□□□□□ -0.4
Clrn1Q8K445 Gm8515-201ENSMUST00000194852 576 ntBASIC12.53□□□□□ -0.4
Clrn1Q8K445 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Gm6983-201ENSMUST00000214912 628 ntBASIC12.53□□□□□ -0.4
Clrn1Q8K445 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.53□□□□□ -0.4
Clrn1Q8K445 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.53□□□□□ -0.4
Clrn1Q8K445 Gm26315-201ENSMUST00000083890 321 ntBASIC12.53□□□□□ -0.4
Clrn1Q8K445 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.53□□□□□ -0.4
Clrn1Q8K445 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Clrn1Q8K445 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clrn1Q8K445 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clrn1Q8K445 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.52□□□□□ -0.4
Clrn1Q8K445 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clrn1Q8K445 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clrn1Q8K445 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clrn1Q8K445 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clrn1Q8K445 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Clrn1Q8K445 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.52□□□□□ -0.4
Clrn1Q8K445 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Clrn1Q8K445 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Clrn1Q8K445 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.52□□□□□ -0.4
Clrn1Q8K445 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn1Q8K445 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn1Q8K445 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn1Q8K445 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Clrn1Q8K445 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn1Q8K445 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn1Q8K445 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Clrn1Q8K445 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn1Q8K445 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn1Q8K445 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn1Q8K445 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Clrn1Q8K445 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Clrn1Q8K445 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn1Q8K445 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn1Q8K445 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn1Q8K445 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clrn1Q8K445 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Clrn1Q8K445 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Mir874-201ENSMUST00000104769 76 ntBASIC12.51□□□□□ -0.41
Clrn1Q8K445 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.51□□□□□ -0.41
Clrn1Q8K445 Gm6745-201ENSMUST00000199216 526 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms