Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cchcr1Q8K2I2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cchcr1Q8K2I2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cchcr1Q8K2I2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cchcr1Q8K2I2 Gm19931-201ENSMUST00000198920 368 ntBASIC15.72■□□□□ 0.11
Cchcr1Q8K2I2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cchcr1Q8K2I2 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cchcr1Q8K2I2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cchcr1Q8K2I2 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.72■□□□□ 0.11
Cchcr1Q8K2I2 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cchcr1Q8K2I2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.72■□□□□ 0.11
Cchcr1Q8K2I2 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cchcr1Q8K2I2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Gm15321-201ENSMUST00000121290 288 ntBASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cchcr1Q8K2I2 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.71■□□□□ 0.1
Cchcr1Q8K2I2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Cchcr1Q8K2I2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cchcr1Q8K2I2 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Cchcr1Q8K2I2 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Cchcr1Q8K2I2 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Gm22189-201ENSMUST00000103822 86 ntBASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Gm5354-201ENSMUST00000182417 973 ntBASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cchcr1Q8K2I2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms