Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Zc3h3Q8CHP0 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Zc3h3Q8CHP0 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.89□□□□□ -0.35
Zc3h3Q8CHP0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Zc3h3Q8CHP0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Zc3h3Q8CHP0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.89□□□□□ -0.35
Zc3h3Q8CHP0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Gm12029-201ENSMUST00000120073 832 ntBASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.88□□□□□ -0.35
Zc3h3Q8CHP0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Gm11340-201ENSMUST00000119226 412 ntBASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Gm22121-201ENSMUST00000175148 54 ntBASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Gm17812-201ENSMUST00000204935 318 ntBASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Zc3h3Q8CHP0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zc3h3Q8CHP0 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Zc3h3Q8CHP0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Zc3h3Q8CHP0 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.86□□□□□ -0.35
Zc3h3Q8CHP0 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.86□□□□□ -0.35
Zc3h3Q8CHP0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zc3h3Q8CHP0 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zc3h3Q8CHP0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zc3h3Q8CHP0 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.86□□□□□ -0.35
Zc3h3Q8CHP0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.86□□□□□ -0.35
Zc3h3Q8CHP0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Zc3h3Q8CHP0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms