Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Gm2420-202ENSMUST00000202224 2249 ntBASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Rab11fip3Q8CHD8 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Gm37437-201ENSMUST00000194451 1937 ntBASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Gm8793-201ENSMUST00000183069 1303 ntBASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab11fip3Q8CHD8 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 Gm11793-201ENSMUST00000120433 981 ntBASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 Gm19931-201ENSMUST00000198920 368 ntBASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 AC154171.1-201ENSMUST00000224610 643 ntBASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 Gm17383-201ENSMUST00000078739 1041 ntBASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 Gm15897-201ENSMUST00000117770 1486 ntBASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 Gm14752-201ENSMUST00000120719 2075 ntBASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip3Q8CHD8 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Gm12363-201ENSMUST00000122250 668 ntBASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Gm27501-201ENSMUST00000183599 107 ntBASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Ighv8-10-201ENSMUST00000199579 358 ntBASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Gm18584-201ENSMUST00000203098 964 ntBASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Gm9823-201ENSMUST00000051212 327 ntBASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rab11fip3Q8CHD8 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms