Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uba3Q8C878 Gm45841-201ENSMUST00000207700 164 ntBASIC13.98□□□□□ -0.17
Uba3Q8C878 Gm5035-201ENSMUST00000215581 927 ntBASIC13.98□□□□□ -0.17
Uba3Q8C878 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Uba3Q8C878 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uba3Q8C878 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uba3Q8C878 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uba3Q8C878 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uba3Q8C878 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uba3Q8C878 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Uba3Q8C878 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uba3Q8C878 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Uba3Q8C878 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uba3Q8C878 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uba3Q8C878 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.98□□□□□ -0.17
Uba3Q8C878 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Uba3Q8C878 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Uba3Q8C878 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.97□□□□□ -0.17
Uba3Q8C878 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.97□□□□□ -0.17
Uba3Q8C878 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.97□□□□□ -0.17
Uba3Q8C878 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Uba3Q8C878 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.97□□□□□ -0.17
Uba3Q8C878 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Uba3Q8C878 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.96□□□□□ -0.17
Uba3Q8C878 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Uba3Q8C878 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Uba3Q8C878 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Uba3Q8C878 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Uba3Q8C878 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Uba3Q8C878 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Uba3Q8C878 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Uba3Q8C878 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Uba3Q8C878 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Uba3Q8C878 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Uba3Q8C878 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.96□□□□□ -0.17
Uba3Q8C878 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Uba3Q8C878 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Uba3Q8C878 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.96□□□□□ -0.17
Uba3Q8C878 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.96□□□□□ -0.17
Uba3Q8C878 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Uba3Q8C878 Gm14350-201ENSMUST00000116642 640 ntBASIC13.96□□□□□ -0.17
Uba3Q8C878 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Uba3Q8C878 Gm8652-201ENSMUST00000181363 964 ntBASIC13.96□□□□□ -0.17
Uba3Q8C878 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Uba3Q8C878 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.96□□□□□ -0.17
Uba3Q8C878 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.96□□□□□ -0.17
Uba3Q8C878 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Uba3Q8C878 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Uba3Q8C878 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Uba3Q8C878 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Uba3Q8C878 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Uba3Q8C878 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Uba3Q8C878 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.96□□□□□ -0.18
Uba3Q8C878 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Uba3Q8C878 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Uba3Q8C878 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Uba3Q8C878 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.18
Uba3Q8C878 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Uba3Q8C878 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Uba3Q8C878 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms