Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cfap54Q8C6S9 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cfap54Q8C6S9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cfap54Q8C6S9 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cfap54Q8C6S9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cfap54Q8C6S9 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cfap54Q8C6S9 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cfap54Q8C6S9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cfap54Q8C6S9 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cfap54Q8C6S9 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cfap54Q8C6S9 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cfap54Q8C6S9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cfap54Q8C6S9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cfap54Q8C6S9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cfap54Q8C6S9 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cfap54Q8C6S9 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.45□□□□□ -0.42
Cfap54Q8C6S9 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Gm10179-201ENSMUST00000086233 688 ntBASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Gm15547-201ENSMUST00000122152 333 ntBASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 CT025551.1-201ENSMUST00000223996 692 ntBASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cfap54Q8C6S9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Gm13296-201ENSMUST00000117854 997 ntBASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Gm7666-201ENSMUST00000146631 819 ntBASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Gm17391-201ENSMUST00000171036 126 ntBASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.43□□□□□ -0.42
Cfap54Q8C6S9 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cfap54Q8C6S9 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Cfap54Q8C6S9 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.42□□□□□ -0.42
Cfap54Q8C6S9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms