Protein–RNA interactions for Protein: Q8BV79

Trank1, TPR and ankyrin repeat-containing protein 1, mousemouse

Predictions only

Length 2,999 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trank1Q8BV79 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trank1Q8BV79 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trank1Q8BV79 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trank1Q8BV79 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trank1Q8BV79 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trank1Q8BV79 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.13□□□□□ -0.63
Trank1Q8BV79 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.13□□□□□ -0.63
Trank1Q8BV79 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trank1Q8BV79 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trank1Q8BV79 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trank1Q8BV79 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trank1Q8BV79 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Gm18038-201ENSMUST00000197900 485 ntBASIC11.12□□□□□ -0.63
Trank1Q8BV79 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.12□□□□□ -0.63
Trank1Q8BV79 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.12□□□□□ -0.63
Trank1Q8BV79 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.12□□□□□ -0.63
Trank1Q8BV79 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.12□□□□□ -0.63
Trank1Q8BV79 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.12□□□□□ -0.63
Trank1Q8BV79 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.12□□□□□ -0.63
Trank1Q8BV79 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trank1Q8BV79 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.12□□□□□ -0.63
Trank1Q8BV79 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Gm8018-201ENSMUST00000173536 789 ntBASIC11.12□□□□□ -0.63
Trank1Q8BV79 Gm28882-201ENSMUST00000185504 314 ntBASIC11.12□□□□□ -0.63
Trank1Q8BV79 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trank1Q8BV79 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trank1Q8BV79 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trank1Q8BV79 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.11□□□□□ -0.63
Trank1Q8BV79 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Gm25880-201ENSMUST00000104331 132 ntBASIC11.11□□□□□ -0.63
Trank1Q8BV79 Gm12291-201ENSMUST00000121627 311 ntBASIC11.11□□□□□ -0.63
Trank1Q8BV79 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.11□□□□□ -0.63
Trank1Q8BV79 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.11□□□□□ -0.63
Trank1Q8BV79 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Gm15711-201ENSMUST00000118889 535 ntBASIC11.11□□□□□ -0.63
Trank1Q8BV79 Gm11340-201ENSMUST00000119226 412 ntBASIC11.11□□□□□ -0.63
Trank1Q8BV79 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trank1Q8BV79 AY036118-201ENSMUST00000200021 923 ntBASIC11.11□□□□□ -0.63
Trank1Q8BV79 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.11□□□□□ -0.63
Trank1Q8BV79 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trank1Q8BV79 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trank1Q8BV79 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trank1Q8BV79 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trank1Q8BV79 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Trank1Q8BV79 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trank1Q8BV79 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms