Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cpne3Q8BT60 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Gm9522-201ENSMUST00000182394 926 ntBASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cpne3Q8BT60 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cpne3Q8BT60 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.83□□□□□ -0.35
Cpne3Q8BT60 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Cpne3Q8BT60 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cpne3Q8BT60 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.83□□□□□ -0.35
Cpne3Q8BT60 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpne3Q8BT60 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpne3Q8BT60 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms