Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Gm42934-201ENSMUST00000196920 1345 ntBASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 AC114543.1-201ENSMUST00000226451 1558 ntBASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Gm12892-201ENSMUST00000117367 1146 ntBASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Gm6226-201ENSMUST00000117765 1146 ntBASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Gm12017-201ENSMUST00000122453 1003 ntBASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Gm18737-201ENSMUST00000173594 937 ntBASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Gm44492-201ENSMUST00000197012 141 ntBASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Gm43073-201ENSMUST00000198200 1189 ntBASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Smco3Q8BQM7 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Gm45751-201ENSMUST00000210185 1573 ntBASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Gm14140-201ENSMUST00000119999 995 ntBASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Gm12350-201ENSMUST00000121208 462 ntBASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Gm37714-201ENSMUST00000194742 342 ntBASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Gm9449-201ENSMUST00000207265 1011 ntBASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Smco3Q8BQM7 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smco3Q8BQM7 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms