Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc40Q8BI79 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Gm14719-201ENSMUST00000121891 340 ntBASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Gm21854-201ENSMUST00000179901 471 ntBASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccdc40Q8BI79 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Ccdc40Q8BI79 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.9□□□□□ -0.19
Ccdc40Q8BI79 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Ccdc40Q8BI79 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Ccdc40Q8BI79 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Gm25925-201ENSMUST00000158314 306 ntBASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Gm29667-201ENSMUST00000190817 490 ntBASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccdc40Q8BI79 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc40Q8BI79 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms