Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Usp6nlQ80XC3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Usp6nlQ80XC3 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Usp6nlQ80XC3 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.63□□□□□ -0.07
Usp6nlQ80XC3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Usp6nlQ80XC3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Usp6nlQ80XC3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Usp6nlQ80XC3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Usp6nlQ80XC3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Usp6nlQ80XC3 Rubie-203ENSMUST00000227803 2430 ntBASIC14.63□□□□□ -0.07
Usp6nlQ80XC3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Usp6nlQ80XC3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Usp6nlQ80XC3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Usp6nlQ80XC3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Usp6nlQ80XC3 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Usp6nlQ80XC3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Gm11222-201ENSMUST00000119005 738 ntBASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Mir433-201ENSMUST00000093564 124 ntBASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Usp6nlQ80XC3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Usp6nlQ80XC3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Gm13316-201ENSMUST00000140537 691 ntBASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Usp6nlQ80XC3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms