Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc116Q80X53 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc116Q80X53 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc116Q80X53 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc116Q80X53 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc116Q80X53 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc116Q80X53 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc116Q80X53 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.03□□□□□ -0.32
Ccdc116Q80X53 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc116Q80X53 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc116Q80X53 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc116Q80X53 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ccdc116Q80X53 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc116Q80X53 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.03□□□□□ -0.32
Ccdc116Q80X53 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc116Q80X53 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ccdc116Q80X53 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ccdc116Q80X53 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Ccdc116Q80X53 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc116Q80X53 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc116Q80X53 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc116Q80X53 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc116Q80X53 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc116Q80X53 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Ccdc116Q80X53 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc116Q80X53 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.02□□□□□ -0.33
Ccdc116Q80X53 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc116Q80X53 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc116Q80X53 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ccdc116Q80X53 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc116Q80X53 Gm38144-201ENSMUST00000192790 465 ntBASIC13.02□□□□□ -0.33
Ccdc116Q80X53 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.02□□□□□ -0.33
Ccdc116Q80X53 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.02□□□□□ -0.33
Ccdc116Q80X53 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc116Q80X53 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc116Q80X53 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc116Q80X53 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc116Q80X53 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc116Q80X53 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc116Q80X53 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc116Q80X53 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc116Q80X53 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc116Q80X53 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.02□□□□□ -0.33
Ccdc116Q80X53 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc116Q80X53 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc116Q80X53 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc116Q80X53 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc116Q80X53 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc116Q80X53 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
Ccdc116Q80X53 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc116Q80X53 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc116Q80X53 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc116Q80X53 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc116Q80X53 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc116Q80X53 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13□□□□□ -0.33
Ccdc116Q80X53 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc116Q80X53 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc116Q80X53 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc116Q80X53 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc116Q80X53 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc116Q80X53 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Ccdc116Q80X53 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc116Q80X53 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Ccdc116Q80X53 Gm11400-201ENSMUST00000120853 1214 ntBASIC13□□□□□ -0.33
Ccdc116Q80X53 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc116Q80X53 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc116Q80X53 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13□□□□□ -0.33
Ccdc116Q80X53 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms