Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ush1gQ80T11 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ush1gQ80T11 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.52□□□□□ -0.08
Ush1gQ80T11 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ush1gQ80T11 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ush1gQ80T11 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Ush1gQ80T11 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ush1gQ80T11 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Ush1gQ80T11 Gm16570-201ENSMUST00000161951 436 ntBASIC14.52□□□□□ -0.09
Ush1gQ80T11 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.52□□□□□ -0.09
Ush1gQ80T11 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
Ush1gQ80T11 Mir3102-201ENSMUST00000175555 104 ntBASIC14.52□□□□□ -0.09
Ush1gQ80T11 Gm38241-201ENSMUST00000192641 898 ntBASIC14.52□□□□□ -0.09
Ush1gQ80T11 Gm43133-201ENSMUST00000197472 463 ntBASIC14.52□□□□□ -0.09
Ush1gQ80T11 Gm18935-201ENSMUST00000212692 664 ntBASIC14.52□□□□□ -0.09
Ush1gQ80T11 Gm9368-201ENSMUST00000219348 831 ntBASIC14.52□□□□□ -0.09
Ush1gQ80T11 Gm45930-201ENSMUST00000221330 292 ntBASIC14.52□□□□□ -0.09
Ush1gQ80T11 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ush1gQ80T11 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ush1gQ80T11 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ush1gQ80T11 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ush1gQ80T11 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ush1gQ80T11 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ush1gQ80T11 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ush1gQ80T11 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ush1gQ80T11 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.51□□□□□ -0.09
Ush1gQ80T11 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ush1gQ80T11 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ush1gQ80T11 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Gm18827-201ENSMUST00000188341 790 ntBASIC14.51□□□□□ -0.09
Ush1gQ80T11 Gm4857-201ENSMUST00000192718 785 ntBASIC14.51□□□□□ -0.09
Ush1gQ80T11 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Snora73a-201ENSMUST00000082453 205 ntBASIC14.51□□□□□ -0.09
Ush1gQ80T11 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ush1gQ80T11 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.51□□□□□ -0.09
Ush1gQ80T11 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.51□□□□□ -0.09
Ush1gQ80T11 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ush1gQ80T11 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.5□□□□□ -0.09
Ush1gQ80T11 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.5□□□□□ -0.09
Ush1gQ80T11 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ush1gQ80T11 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Gm12241-201ENSMUST00000118330 726 ntBASIC14.5□□□□□ -0.09
Ush1gQ80T11 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Gm37497-201ENSMUST00000195830 798 ntBASIC14.5□□□□□ -0.09
Ush1gQ80T11 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.5□□□□□ -0.09
Ush1gQ80T11 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Gm18056-201ENSMUST00000207670 568 ntBASIC14.5□□□□□ -0.09
Ush1gQ80T11 Gm18061-201ENSMUST00000208350 562 ntBASIC14.5□□□□□ -0.09
Ush1gQ80T11 Gm18063-201ENSMUST00000208529 568 ntBASIC14.5□□□□□ -0.09
Ush1gQ80T11 Gm18052-201ENSMUST00000208750 559 ntBASIC14.5□□□□□ -0.09
Ush1gQ80T11 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.5□□□□□ -0.09
Ush1gQ80T11 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.5□□□□□ -0.09
Ush1gQ80T11 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ush1gQ80T11 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms