Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vma21Q78T54 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.83□□□□□ -0.68
Vma21Q78T54 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.83□□□□□ -0.68
Vma21Q78T54 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vma21Q78T54 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vma21Q78T54 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.83□□□□□ -0.68
Vma21Q78T54 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vma21Q78T54 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Vma21Q78T54 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vma21Q78T54 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.83□□□□□ -0.68
Vma21Q78T54 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Vma21Q78T54 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Vma21Q78T54 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Vma21Q78T54 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.82□□□□□ -0.68
Vma21Q78T54 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.82□□□□□ -0.68
Vma21Q78T54 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 Syt7-205ENSMUST00000224135 1557 ntBASIC10.82□□□□□ -0.68
Vma21Q78T54 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.82□□□□□ -0.68
Vma21Q78T54 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.82□□□□□ -0.68
Vma21Q78T54 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC10.82□□□□□ -0.68
Vma21Q78T54 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.82□□□□□ -0.68
Vma21Q78T54 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Vma21Q78T54 Gm27680-201ENSMUST00000184192 160 ntBASIC10.82□□□□□ -0.68
Vma21Q78T54 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Vma21Q78T54 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Vma21Q78T54 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Vma21Q78T54 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.82□□□□□ -0.68
Vma21Q78T54 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.82□□□□□ -0.68
Vma21Q78T54 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Vma21Q78T54 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Vma21Q78T54 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.82□□□□□ -0.68
Vma21Q78T54 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.82□□□□□ -0.68
Vma21Q78T54 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vma21Q78T54 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.82□□□□□ -0.68
Vma21Q78T54 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.82□□□□□ -0.68
Vma21Q78T54 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.81□□□□□ -0.68
Vma21Q78T54 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Vma21Q78T54 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vma21Q78T54 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vma21Q78T54 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vma21Q78T54 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC10.81□□□□□ -0.68
Vma21Q78T54 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Vma21Q78T54 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Vma21Q78T54 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.81□□□□□ -0.68
Vma21Q78T54 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vma21Q78T54 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC10.81□□□□□ -0.68
Vma21Q78T54 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vma21Q78T54 Gm26308-201ENSMUST00000157768 69 ntBASIC10.81□□□□□ -0.68
Vma21Q78T54 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.81□□□□□ -0.68
Vma21Q78T54 Gm22175-201ENSMUST00000175007 78 ntBASIC10.81□□□□□ -0.68
Vma21Q78T54 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vma21Q78T54 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.81□□□□□ -0.68
Vma21Q78T54 Gm27702-201ENSMUST00000184512 56 ntBASIC10.81□□□□□ -0.68
Vma21Q78T54 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC10.81□□□□□ -0.68
Vma21Q78T54 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vma21Q78T54 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.81□□□□□ -0.68
Vma21Q78T54 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vma21Q78T54 AC132104.2-201ENSMUST00000215011 266 ntBASIC10.81□□□□□ -0.68
Vma21Q78T54 Gm6888-201ENSMUST00000221983 706 ntBASIC10.81□□□□□ -0.68
Vma21Q78T54 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vma21Q78T54 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vma21Q78T54 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Vma21Q78T54 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vma21Q78T54 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Vma21Q78T54 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Vma21Q78T54 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vma21Q78T54 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vma21Q78T54 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Vma21Q78T54 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vma21Q78T54 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vma21Q78T54 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vma21Q78T54 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Vma21Q78T54 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Vma21Q78T54 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vma21Q78T54 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vma21Q78T54 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.81□□□□□ -0.68
Vma21Q78T54 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vma21Q78T54 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms