Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Smarcd3Q6P9Z1 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Gm22175-201ENSMUST00000175007 78 ntBASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Gm6888-201ENSMUST00000221983 706 ntBASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Smarcd3Q6P9Z1 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Syt7-205ENSMUST00000224135 1557 ntBASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Gm15240-201ENSMUST00000118156 720 ntBASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Gm15920-201ENSMUST00000118998 402 ntBASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Gm27772-201ENSMUST00000184900 187 ntBASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Gm18905-201ENSMUST00000205454 928 ntBASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smarcd3Q6P9Z1 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms