Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Slx4Q6P1D7 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Slx4Q6P1D7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Slx4Q6P1D7 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Slx4Q6P1D7 Gm45598-202ENSMUST00000210719 986 ntBASIC20.06■□□□□ 0.8
Slx4Q6P1D7 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slx4Q6P1D7 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slx4Q6P1D7 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Slx4Q6P1D7 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Slx4Q6P1D7 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Slx4Q6P1D7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slx4Q6P1D7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slx4Q6P1D7 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slx4Q6P1D7 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC20.06■□□□□ 0.8
Slx4Q6P1D7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slx4Q6P1D7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Slx4Q6P1D7 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slx4Q6P1D7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.06■□□□□ 0.8
Slx4Q6P1D7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slx4Q6P1D7 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slx4Q6P1D7 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slx4Q6P1D7 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slx4Q6P1D7 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slx4Q6P1D7 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Slx4Q6P1D7 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slx4Q6P1D7 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC20.05■□□□□ 0.8
Slx4Q6P1D7 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC20.05■□□□□ 0.8
Slx4Q6P1D7 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Slx4Q6P1D7 Gm10179-201ENSMUST00000086233 688 ntBASIC20.05■□□□□ 0.8
Slx4Q6P1D7 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slx4Q6P1D7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slx4Q6P1D7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slx4Q6P1D7 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slx4Q6P1D7 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC20.05■□□□□ 0.8
Slx4Q6P1D7 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slx4Q6P1D7 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slx4Q6P1D7 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slx4Q6P1D7 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slx4Q6P1D7 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Slx4Q6P1D7 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slx4Q6P1D7 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slx4Q6P1D7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Slx4Q6P1D7 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slx4Q6P1D7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Slx4Q6P1D7 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC20.04■□□□□ 0.8
Slx4Q6P1D7 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC20.04■□□□□ 0.8
Slx4Q6P1D7 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slx4Q6P1D7 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slx4Q6P1D7 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slx4Q6P1D7 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slx4Q6P1D7 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC20.04■□□□□ 0.8
Slx4Q6P1D7 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slx4Q6P1D7 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Slx4Q6P1D7 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC20.04■□□□□ 0.8
Slx4Q6P1D7 Gm16296-201ENSMUST00000159905 325 ntBASIC20.04■□□□□ 0.8
Slx4Q6P1D7 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slx4Q6P1D7 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC20.04■□□□□ 0.8
Slx4Q6P1D7 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Slx4Q6P1D7 Gm10312-201ENSMUST00000078515 489 ntBASIC20.04■□□□□ 0.8
Slx4Q6P1D7 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Slx4Q6P1D7 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slx4Q6P1D7 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Slx4Q6P1D7 Gm44999-201ENSMUST00000207456 1493 ntBASIC20.03■□□□□ 0.8
Slx4Q6P1D7 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Slx4Q6P1D7 AC122197.2-201ENSMUST00000219196 1635 ntBASIC20.03■□□□□ 0.8
Slx4Q6P1D7 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slx4Q6P1D7 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slx4Q6P1D7 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slx4Q6P1D7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slx4Q6P1D7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
Slx4Q6P1D7 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slx4Q6P1D7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slx4Q6P1D7 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC20.03■□□□□ 0.8
Slx4Q6P1D7 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Slx4Q6P1D7 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC20.03■□□□□ 0.8
Slx4Q6P1D7 Gm10051-201ENSMUST00000145209 414 ntBASIC20.03■□□□□ 0.8
Slx4Q6P1D7 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC20.03■□□□□ 0.8
Slx4Q6P1D7 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC20.03■□□□□ 0.8
Slx4Q6P1D7 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Slx4Q6P1D7 AC108416.1-202ENSMUST00000228927 1201 ntBASIC20.03■□□□□ 0.8
Slx4Q6P1D7 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Slx4Q6P1D7 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC20.03■□□□□ 0.8
Slx4Q6P1D7 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Slx4Q6P1D7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Slx4Q6P1D7 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Slx4Q6P1D7 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slx4Q6P1D7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Slx4Q6P1D7 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slx4Q6P1D7 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slx4Q6P1D7 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slx4Q6P1D7 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slx4Q6P1D7 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slx4Q6P1D7 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slx4Q6P1D7 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slx4Q6P1D7 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Slx4Q6P1D7 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Slx4Q6P1D7 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Slx4Q6P1D7 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Slx4Q6P1D7 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC20.02■□□□□ 0.8
Slx4Q6P1D7 Gm15515-201ENSMUST00000117827 822 ntBASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms