Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gm5687-201ENSMUST00000118252 640 ntBASIC13.06□□□□□ -0.32
VclQ64727 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.06□□□□□ -0.32
VclQ64727 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
VclQ64727 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
VclQ64727 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
VclQ64727 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
VclQ64727 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.06□□□□□ -0.32
VclQ64727 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.06□□□□□ -0.32
VclQ64727 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.06□□□□□ -0.32
VclQ64727 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VclQ64727 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VclQ64727 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
VclQ64727 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VclQ64727 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.06□□□□□ -0.32
VclQ64727 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VclQ64727 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VclQ64727 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.06□□□□□ -0.32
VclQ64727 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.06□□□□□ -0.32
VclQ64727 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VclQ64727 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VclQ64727 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VclQ64727 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
VclQ64727 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.05□□□□□ -0.32
VclQ64727 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
VclQ64727 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
VclQ64727 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
VclQ64727 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
VclQ64727 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.05□□□□□ -0.32
VclQ64727 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.05□□□□□ -0.32
VclQ64727 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.05□□□□□ -0.32
VclQ64727 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.05□□□□□ -0.32
VclQ64727 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.05□□□□□ -0.32
VclQ64727 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
VclQ64727 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.05□□□□□ -0.32
VclQ64727 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.05□□□□□ -0.32
VclQ64727 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VclQ64727 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.04□□□□□ -0.32
VclQ64727 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
VclQ64727 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.04□□□□□ -0.32
VclQ64727 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.04□□□□□ -0.32
VclQ64727 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.04□□□□□ -0.32
VclQ64727 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.04□□□□□ -0.32
VclQ64727 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.04□□□□□ -0.32
VclQ64727 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.04□□□□□ -0.32
VclQ64727 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.04□□□□□ -0.32
VclQ64727 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
VclQ64727 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
VclQ64727 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.04□□□□□ -0.32
VclQ64727 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.04□□□□□ -0.32
VclQ64727 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
VclQ64727 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VclQ64727 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms