Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Gli3Q61602 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gli3Q61602 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gli3Q61602 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gli3Q61602 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC17.4■□□□□ 0.38
Gli3Q61602 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC17.4■□□□□ 0.38
Gli3Q61602 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Gli3Q61602 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Gli3Q61602 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.4■□□□□ 0.38
Gli3Q61602 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Gli3Q61602 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gli3Q61602 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC17.4■□□□□ 0.38
Gli3Q61602 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gli3Q61602 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gli3Q61602 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gli3Q61602 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gli3Q61602 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gli3Q61602 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gli3Q61602 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gli3Q61602 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
Gli3Q61602 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gli3Q61602 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gli3Q61602 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gli3Q61602 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC17.4■□□□□ 0.38
Gli3Q61602 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Gli3Q61602 Gm37458-201ENSMUST00000194055 410 ntBASIC17.4■□□□□ 0.38
Gli3Q61602 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC17.4■□□□□ 0.38
Gli3Q61602 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC17.4■□□□□ 0.38
Gli3Q61602 Gm18706-201ENSMUST00000210053 1066 ntBASIC17.4■□□□□ 0.38
Gli3Q61602 Gm35713-201ENSMUST00000210516 199 ntBASIC17.4■□□□□ 0.38
Gli3Q61602 Gm4157-201ENSMUST00000211647 679 ntBASIC17.4■□□□□ 0.38
Gli3Q61602 AC168279.1-201ENSMUST00000214611 382 ntBASIC17.4■□□□□ 0.38
Gli3Q61602 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC17.4■□□□□ 0.38
Gli3Q61602 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Gli3Q61602 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gli3Q61602 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC17.4■□□□□ 0.38
Gli3Q61602 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Gli3Q61602 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gli3Q61602 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Gli3Q61602 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC17.39■□□□□ 0.38
Gli3Q61602 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Gli3Q61602 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC17.39■□□□□ 0.37
Gli3Q61602 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC17.39■□□□□ 0.37
Gli3Q61602 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gli3Q61602 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Gli3Q61602 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gli3Q61602 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Gli3Q61602 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gli3Q61602 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gli3Q61602 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gli3Q61602 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gli3Q61602 Gm12943-201ENSMUST00000119616 210 ntBASIC17.39■□□□□ 0.37
Gli3Q61602 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gli3Q61602 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC17.39■□□□□ 0.37
Gli3Q61602 Gm22442-201ENSMUST00000157256 144 ntBASIC17.39■□□□□ 0.37
Gli3Q61602 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gli3Q61602 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC17.39■□□□□ 0.37
Gli3Q61602 CT025553.1-201ENSMUST00000226292 299 ntBASIC17.39■□□□□ 0.37
Gli3Q61602 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gli3Q61602 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Gli3Q61602 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gli3Q61602 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gli3Q61602 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gli3Q61602 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gli3Q61602 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gli3Q61602 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Gli3Q61602 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gli3Q61602 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gli3Q61602 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gli3Q61602 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Gli3Q61602 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC17.38■□□□□ 0.37
Gli3Q61602 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gli3Q61602 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gli3Q61602 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gli3Q61602 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Gli3Q61602 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gli3Q61602 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Gli3Q61602 Gm11509-201ENSMUST00000117358 325 ntBASIC17.38■□□□□ 0.37
Gli3Q61602 Gm11979-201ENSMUST00000119629 743 ntBASIC17.38■□□□□ 0.37
Gli3Q61602 Gm5257-201ENSMUST00000121823 790 ntBASIC17.38■□□□□ 0.37
Gli3Q61602 Cd63-ps-202ENSMUST00000154992 717 ntBASIC17.38■□□□□ 0.37
Gli3Q61602 Gm15744-201ENSMUST00000161734 213 ntBASIC17.38■□□□□ 0.37
Gli3Q61602 Gm18201-201ENSMUST00000174735 875 ntBASIC17.38■□□□□ 0.37
Gli3Q61602 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Gli3Q61602 Gm8100-201ENSMUST00000182906 988 ntBASIC17.38■□□□□ 0.37
Gli3Q61602 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gli3Q61602 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gli3Q61602 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC17.38■□□□□ 0.37
Gli3Q61602 Gm45500-201ENSMUST00000211676 803 ntBASIC17.38■□□□□ 0.37
Gli3Q61602 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC17.38■□□□□ 0.37
Gli3Q61602 Gm10288-201ENSMUST00000084614 537 ntBASIC17.38■□□□□ 0.37
Gli3Q61602 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gli3Q61602 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Gli3Q61602 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gli3Q61602 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC17.38■□□□□ 0.37
Gli3Q61602 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Gli3Q61602 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gli3Q61602 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gli3Q61602 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gli3Q61602 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms