Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Foxc1Q61572 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Foxc1Q61572 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Foxc1Q61572 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Foxc1Q61572 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Foxc1Q61572 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Foxc1Q61572 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Foxc1Q61572 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Foxc1Q61572 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC9.95□□□□□ -0.82
Foxc1Q61572 AC158595.1-201ENSMUST00000217989 1435 ntBASIC9.95□□□□□ -0.82
Foxc1Q61572 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Foxc1Q61572 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Foxc1Q61572 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC9.95□□□□□ -0.82
Foxc1Q61572 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Foxc1Q61572 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Foxc1Q61572 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC9.95□□□□□ -0.82
Foxc1Q61572 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC9.95□□□□□ -0.82
Foxc1Q61572 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Foxc1Q61572 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Foxc1Q61572 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Foxc1Q61572 Gm37105-201ENSMUST00000192251 2085 ntBASIC9.95□□□□□ -0.82
Foxc1Q61572 Gm37411-201ENSMUST00000194180 2282 ntBASIC9.95□□□□□ -0.82
Foxc1Q61572 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Foxc1Q61572 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Foxc1Q61572 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
Foxc1Q61572 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC9.95□□□□□ -0.82
Foxc1Q61572 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Foxc1Q61572 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Foxc1Q61572 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Foxc1Q61572 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Foxc1Q61572 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC9.95□□□□□ -0.82
Foxc1Q61572 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Foxc1Q61572 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Foxc1Q61572 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Foxc1Q61572 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Foxc1Q61572 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC9.94□□□□□ -0.82
Foxc1Q61572 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Gm37660-201ENSMUST00000192754 1732 ntBASIC9.94□□□□□ -0.82
Foxc1Q61572 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Foxc1Q61572 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Ldb3-207ENSMUST00000227819 1499 ntBASIC9.94□□□□□ -0.82
Foxc1Q61572 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Foxc1Q61572 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Foxc1Q61572 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC9.94□□□□□ -0.82
Foxc1Q61572 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Gm11622-201ENSMUST00000120525 691 ntBASIC9.94□□□□□ -0.82
Foxc1Q61572 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Gm29667-201ENSMUST00000190817 490 ntBASIC9.94□□□□□ -0.82
Foxc1Q61572 Gm18692-201ENSMUST00000193047 511 ntBASIC9.94□□□□□ -0.82
Foxc1Q61572 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC9.94□□□□□ -0.82
Foxc1Q61572 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC9.94□□□□□ -0.82
Foxc1Q61572 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC9.94□□□□□ -0.82
Foxc1Q61572 AC165157.4-201ENSMUST00000220587 139 ntBASIC9.94□□□□□ -0.82
Foxc1Q61572 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC9.94□□□□□ -0.82
Foxc1Q61572 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Hist1h2al-201ENSMUST00000091708 339 ntBASIC9.94□□□□□ -0.82
Foxc1Q61572 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
Foxc1Q61572 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Foxc1Q61572 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Foxc1Q61572 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC9.94□□□□□ -0.82
Foxc1Q61572 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Foxc1Q61572 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Foxc1Q61572 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC9.94□□□□□ -0.82
Foxc1Q61572 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC9.94□□□□□ -0.82
Foxc1Q61572 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Foxc1Q61572 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC9.94□□□□□ -0.82
Foxc1Q61572 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Foxc1Q61572 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Foxc1Q61572 AC115735.4-201ENSMUST00000227460 1944 ntBASIC9.94□□□□□ -0.82
Foxc1Q61572 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Foxc1Q61572 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC9.93□□□□□ -0.82
Foxc1Q61572 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Foxc1Q61572 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Foxc1Q61572 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms