Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sox17Q61473 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sox17Q61473 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sox17Q61473 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox17Q61473 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Sox17Q61473 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox17Q61473 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox17Q61473 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox17Q61473 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.43□□□□□ -0.42
Sox17Q61473 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox17Q61473 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.43□□□□□ -0.42
Sox17Q61473 Gm14494-201ENSMUST00000118786 435 ntBASIC12.43□□□□□ -0.42
Sox17Q61473 Mir1897-201ENSMUST00000122581 272 ntBASIC12.43□□□□□ -0.42
Sox17Q61473 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox17Q61473 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.43□□□□□ -0.42
Sox17Q61473 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.43□□□□□ -0.42
Sox17Q61473 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Sox17Q61473 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Sox17Q61473 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Sox17Q61473 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Sox17Q61473 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Sox17Q61473 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox17Q61473 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox17Q61473 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox17Q61473 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sox17Q61473 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox17Q61473 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.43□□□□□ -0.42
Sox17Q61473 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Sox17Q61473 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sox17Q61473 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sox17Q61473 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Sox17Q61473 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sox17Q61473 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Sox17Q61473 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 Gm15770-201ENSMUST00000117498 584 ntBASIC12.42□□□□□ -0.42
Sox17Q61473 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sox17Q61473 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.42□□□□□ -0.42
Sox17Q61473 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.42□□□□□ -0.42
Sox17Q61473 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sox17Q61473 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox17Q61473 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.42□□□□□ -0.42
Sox17Q61473 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sox17Q61473 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Sox17Q61473 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.41□□□□□ -0.42
Sox17Q61473 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sox17Q61473 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.41□□□□□ -0.42
Sox17Q61473 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.41□□□□□ -0.42
Sox17Q61473 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Gm45841-201ENSMUST00000207700 164 ntBASIC12.41□□□□□ -0.42
Sox17Q61473 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Sox17Q61473 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Sox17Q61473 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sox17Q61473 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Sox17Q61473 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sox17Q61473 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.41□□□□□ -0.42
Sox17Q61473 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms