Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm9996-201ENSMUST00000070359 913 ntBASIC12.77□□□□□ -0.36
Col12a1Q60847 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col12a1Q60847 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col12a1Q60847 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.77□□□□□ -0.36
Col12a1Q60847 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Col12a1Q60847 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.77□□□□□ -0.36
Col12a1Q60847 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Col12a1Q60847 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col12a1Q60847 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col12a1Q60847 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col12a1Q60847 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col12a1Q60847 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col12a1Q60847 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Col12a1Q60847 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Col12a1Q60847 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col12a1Q60847 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Col12a1Q60847 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.77□□□□□ -0.37
Col12a1Q60847 Gm4862-201ENSMUST00000170405 438 ntBASIC12.77□□□□□ -0.37
Col12a1Q60847 Gm44329-201ENSMUST00000197469 112 ntBASIC12.77□□□□□ -0.37
Col12a1Q60847 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col12a1Q60847 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.77□□□□□ -0.37
Col12a1Q60847 Gm45598-202ENSMUST00000210719 986 ntBASIC12.77□□□□□ -0.37
Col12a1Q60847 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.77□□□□□ -0.37
Col12a1Q60847 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col12a1Q60847 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col12a1Q60847 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Col12a1Q60847 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col12a1Q60847 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Col12a1Q60847 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col12a1Q60847 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.77□□□□□ -0.37
Col12a1Q60847 Gm18038-201ENSMUST00000197900 485 ntBASIC12.77□□□□□ -0.37
Col12a1Q60847 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Col12a1Q60847 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.77□□□□□ -0.37
Col12a1Q60847 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col12a1Q60847 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col12a1Q60847 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col12a1Q60847 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col12a1Q60847 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col12a1Q60847 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col12a1Q60847 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col12a1Q60847 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Col12a1Q60847 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col12a1Q60847 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col12a1Q60847 Gm28882-201ENSMUST00000185504 314 ntBASIC12.76□□□□□ -0.37
Col12a1Q60847 Gm19187-201ENSMUST00000206781 892 ntBASIC12.76□□□□□ -0.37
Col12a1Q60847 Gm45398-201ENSMUST00000210561 165 ntBASIC12.76□□□□□ -0.37
Col12a1Q60847 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col12a1Q60847 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col12a1Q60847 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col12a1Q60847 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col12a1Q60847 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col12a1Q60847 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col12a1Q60847 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col12a1Q60847 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.76□□□□□ -0.37
Col12a1Q60847 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Col12a1Q60847 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.76□□□□□ -0.37
Col12a1Q60847 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col12a1Q60847 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col12a1Q60847 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col12a1Q60847 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col12a1Q60847 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.76□□□□□ -0.37
Col12a1Q60847 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Col12a1Q60847 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col12a1Q60847 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col12a1Q60847 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col12a1Q60847 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col12a1Q60847 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Col12a1Q60847 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col12a1Q60847 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col12a1Q60847 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Col12a1Q60847 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col12a1Q60847 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col12a1Q60847 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Col12a1Q60847 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col12a1Q60847 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col12a1Q60847 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.75□□□□□ -0.37
Col12a1Q60847 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col12a1Q60847 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col12a1Q60847 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col12a1Q60847 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col12a1Q60847 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.75□□□□□ -0.37
Col12a1Q60847 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Col12a1Q60847 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.75□□□□□ -0.37
Col12a1Q60847 Gm15881-201ENSMUST00000148792 942 ntBASIC12.75□□□□□ -0.37
Col12a1Q60847 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col12a1Q60847 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col12a1Q60847 Gm8584-201ENSMUST00000171982 758 ntBASIC12.75□□□□□ -0.37
Col12a1Q60847 Gm43520-201ENSMUST00000197996 164 ntBASIC12.75□□□□□ -0.37
Col12a1Q60847 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col12a1Q60847 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Col12a1Q60847 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col12a1Q60847 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col12a1Q60847 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col12a1Q60847 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col12a1Q60847 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col12a1Q60847 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col12a1Q60847 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col12a1Q60847 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col12a1Q60847 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col12a1Q60847 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms