Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClpbQ60649 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.76□□□□□ -0.37
ClpbQ60649 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClpbQ60649 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClpbQ60649 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ClpbQ60649 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClpbQ60649 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClpbQ60649 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClpbQ60649 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClpbQ60649 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ClpbQ60649 Gm15806-201ENSMUST00000120696 955 ntBASIC12.76□□□□□ -0.37
ClpbQ60649 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.76□□□□□ -0.37
ClpbQ60649 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.76□□□□□ -0.37
ClpbQ60649 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.76□□□□□ -0.37
ClpbQ60649 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClpbQ60649 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClpbQ60649 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClpbQ60649 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClpbQ60649 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.76□□□□□ -0.37
ClpbQ60649 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClpbQ60649 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClpbQ60649 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClpbQ60649 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClpbQ60649 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClpbQ60649 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClpbQ60649 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClpbQ60649 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.76□□□□□ -0.37
ClpbQ60649 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClpbQ60649 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClpbQ60649 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ClpbQ60649 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ClpbQ60649 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.75□□□□□ -0.37
ClpbQ60649 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
ClpbQ60649 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ClpbQ60649 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.75□□□□□ -0.37
ClpbQ60649 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.75□□□□□ -0.37
ClpbQ60649 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.75□□□□□ -0.37
ClpbQ60649 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.75□□□□□ -0.37
ClpbQ60649 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.75□□□□□ -0.37
ClpbQ60649 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.75□□□□□ -0.37
ClpbQ60649 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
ClpbQ60649 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ClpbQ60649 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ClpbQ60649 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ClpbQ60649 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ClpbQ60649 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ClpbQ60649 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ClpbQ60649 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.74□□□□□ -0.37
ClpbQ60649 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.74□□□□□ -0.37
ClpbQ60649 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Gm15371-201ENSMUST00000117057 784 ntBASIC12.74□□□□□ -0.37
ClpbQ60649 Gm15678-201ENSMUST00000117573 960 ntBASIC12.74□□□□□ -0.37
ClpbQ60649 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.74□□□□□ -0.37
ClpbQ60649 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ClpbQ60649 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Gm15376-201ENSMUST00000122258 783 ntBASIC12.74□□□□□ -0.37
ClpbQ60649 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ClpbQ60649 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms