Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav5d-4Q5R1F6 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Syt7-205ENSMUST00000224135 1557 ntBASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav5d-4Q5R1F6 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Gm5354-201ENSMUST00000182417 973 ntBASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Gm29608-201ENSMUST00000190444 463 ntBASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav5d-4Q5R1F6 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms