Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 Gm18556-201ENSMUST00000219748 1031 ntBASIC17.11■□□□□ 0.33
Mdc1Q5PSV9 CT025533.2-201ENSMUST00000228715 1248 ntBASIC17.11■□□□□ 0.33
Mdc1Q5PSV9 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Mdc1Q5PSV9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mdc1Q5PSV9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mdc1Q5PSV9 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mdc1Q5PSV9 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mdc1Q5PSV9 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Mdc1Q5PSV9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mdc1Q5PSV9 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mdc1Q5PSV9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mdc1Q5PSV9 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Mdc1Q5PSV9 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC17.11■□□□□ 0.33
Mdc1Q5PSV9 Gm37737-201ENSMUST00000195013 1638 ntBASIC17.11■□□□□ 0.33
Mdc1Q5PSV9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Mdc1Q5PSV9 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mdc1Q5PSV9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mdc1Q5PSV9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mdc1Q5PSV9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Gm10782-202ENSMUST00000223775 1480 ntBASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Gm11331-201ENSMUST00000119764 288 ntBASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Gm15547-201ENSMUST00000122152 333 ntBASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Gm5523-201ENSMUST00000180415 997 ntBASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Gm12502-201ENSMUST00000120197 444 ntBASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 AC167013.1-201ENSMUST00000228592 202 ntBASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mdc1Q5PSV9 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Gm14921-201ENSMUST00000118643 908 ntBASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Gm8856-201ENSMUST00000185254 1144 ntBASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Gm5904-201ENSMUST00000210286 865 ntBASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Gm5639-201ENSMUST00000122305 2403 ntBASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mdc1Q5PSV9 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mdc1Q5PSV9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mdc1Q5PSV9 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mdc1Q5PSV9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Mdc1Q5PSV9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mdc1Q5PSV9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mdc1Q5PSV9 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mdc1Q5PSV9 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mdc1Q5PSV9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mdc1Q5PSV9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC17.08■□□□□ 0.33
Mdc1Q5PSV9 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mdc1Q5PSV9 Gm19963-201ENSMUST00000208413 1255 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms