Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Gm11340-201ENSMUST00000119226 412 ntBASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Gm7046-201ENSMUST00000221351 977 ntBASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
Trim41Q5NCC3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim41Q5NCC3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim41Q5NCC3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim41Q5NCC3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim41Q5NCC3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC22.96■■□□□ 1.27
Trim41Q5NCC3 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Trim41Q5NCC3 Gm9678-201ENSMUST00000198979 1149 ntBASIC22.96■■□□□ 1.27
Trim41Q5NCC3 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Trim41Q5NCC3 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Trim41Q5NCC3 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim41Q5NCC3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim41Q5NCC3 Gm8793-201ENSMUST00000183069 1303 ntBASIC22.96■■□□□ 1.27
Trim41Q5NCC3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim41Q5NCC3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim41Q5NCC3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
Trim41Q5NCC3 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.27
Trim41Q5NCC3 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Trim41Q5NCC3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC22.95■■□□□ 1.26
Trim41Q5NCC3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim41Q5NCC3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Trim41Q5NCC3 Gm12363-201ENSMUST00000122250 668 ntBASIC22.95■■□□□ 1.26
Trim41Q5NCC3 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC22.95■■□□□ 1.26
Trim41Q5NCC3 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC22.95■■□□□ 1.26
Trim41Q5NCC3 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Trim41Q5NCC3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC22.95■■□□□ 1.26
Trim41Q5NCC3 Gm7809-201ENSMUST00000153199 742 ntBASIC22.95■■□□□ 1.26
Trim41Q5NCC3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Trim41Q5NCC3 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Trim41Q5NCC3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC22.95■■□□□ 1.26
Trim41Q5NCC3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Trim41Q5NCC3 Gm43273-201ENSMUST00000199649 2594 ntBASIC22.95■■□□□ 1.26
Trim41Q5NCC3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim41Q5NCC3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim41Q5NCC3 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim41Q5NCC3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim41Q5NCC3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Trim41Q5NCC3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Trim41Q5NCC3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim41Q5NCC3 Gm43056-201ENSMUST00000197865 2791 ntBASIC22.95■■□□□ 1.26
Trim41Q5NCC3 Gm28182-201ENSMUST00000188354 2477 ntBASIC22.94■■□□□ 1.26
Trim41Q5NCC3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Trim41Q5NCC3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Trim41Q5NCC3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim41Q5NCC3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim41Q5NCC3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim41Q5NCC3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Trim41Q5NCC3 Gm6023-201ENSMUST00000118217 606 ntBASIC22.94■■□□□ 1.26
Trim41Q5NCC3 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC22.94■■□□□ 1.26
Trim41Q5NCC3 Gm26185-201ENSMUST00000157692 266 ntBASIC22.94■■□□□ 1.26
Trim41Q5NCC3 AC135669.1-202ENSMUST00000216742 540 ntBASIC22.94■■□□□ 1.26
Trim41Q5NCC3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim41Q5NCC3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim41Q5NCC3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim41Q5NCC3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Trim41Q5NCC3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC22.94■■□□□ 1.26
Trim41Q5NCC3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
Trim41Q5NCC3 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Trim41Q5NCC3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim41Q5NCC3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim41Q5NCC3 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim41Q5NCC3 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim41Q5NCC3 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
Trim41Q5NCC3 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC22.93■■□□□ 1.26
Trim41Q5NCC3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim41Q5NCC3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim41Q5NCC3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim41Q5NCC3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Trim41Q5NCC3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Trim41Q5NCC3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
Trim41Q5NCC3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms