Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm18018-201ENSMUST00000198273 408 ntBASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Gm18307-201ENSMUST00000206864 949 ntBASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Syne3Q4FZC9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne3Q4FZC9 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Gm8515-201ENSMUST00000194852 576 ntBASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Gm45668-201ENSMUST00000211271 493 ntBASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne3Q4FZC9 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne3Q4FZC9 Gm12091-201ENSMUST00000146791 830 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms